Description : component *(TFB2) of TFIIh basal transcription factor complex & original description: none
Gene families : OG0006103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006103_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g43753 | No alias | component *(TFB2) of TFIIh basal transcription factor... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g31858 | No alias | component *(TFB2) of TFIIh basal transcription factor... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g01478 | No alias | component *(TFB2) of TFIIh basal transcription factor... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g10341 | No alias | component *(TFB2) of TFIIh basal transcription factor... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e006515_P002 | Zm00001e006515 | subunit TFB2 of core module. component TFB2 of TFIIh... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000439 | transcription factor TFIIH core complex | IEA | Interproscan |
MF | GO:0001671 | ATPase activator activity | IEA | Interproscan |
BP | GO:0006289 | nucleotide-excision repair | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003729 | mRNA binding | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005685 | U1 snRNP | IEP | HCCA |
BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |