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Description : not classified & original description: none
Gene families : OG0001514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001514_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g03816 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G58520 | No alias | Ubiquitin carboxyl-terminal hydrolase family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g080504 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g33839 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08851 | RPD1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g00927 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G112500.1 | Ceric.04G112500 | not classified & original description: pacid=50632449... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.16G075200.1 | RPD1, Ceric.16G075200 | not classified & original description: pacid=50589258... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G018700.1 | Ceric.24G018700 | not classified & original description: pacid=50629155... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g23978 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g32540.1 | LOC_Os02g32540 | no description available(sp|q9zuz6|wtf9_arath : 134.0) | 0.02 | OrthoFinder output from all 47 species | |
| MA_456914g0010 | No alias | no description available(sp|q9zuz6|wtf9_arath : 228.0) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g05381 | RPD1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07142 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04531 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g12440 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014695_P001 | Zm00001e014695 | no description available(sp|q9zuz6|wtf9_arath : 128.0) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000439 | transcription factor TFIIH core complex | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021099 | PORR_domain | 57 | 388 |
| No external refs found! |