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  5. Cba_g03797

Cba_g03797 (RAD51, ATRAD51)


Aliases : RAD51, ATRAD51

Description : component *(RAD51) of BRCC regulatory deubiquination complex & original description: none


Gene families : OG0001716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001716_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03797
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT5G57450 XRCC3, ATXRCC3 homolog of X-ray repair cross complementing 3 (XRCC3) 0.02 OrthoFinder output from all 47 species
Len_g22631 ARLIM15, DMC1, ATDMC1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18325 XRCC3, ATXRCC3 component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021196 XRCC3, ATXRCC3 component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.02 OrthoFinder output from all 47 species
Solyc07g055170.1.1 XRCC3, ATXRCC3,... component XRCC3 of RAD51c-XRCC3 accessory DSB repair heterodimer 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013632 DNA_recomb/repair_Rad51_C 94 346
No external refs found!