- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ATRER1A
Description : membrane protein cargo receptor *(RER1) & original description: none
Gene families : OG0001450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001450_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g03583 | |
| Cluster | HCCA: Cluster_26 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g102463 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g104878 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.15G039700.1 | ATRER1A, Ceric.15G039700 | membrane protein cargo receptor *(RER1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10202775g0010 | RER1B, ATRER1B | Protein RER1B OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Smo171760 | ATRER1A | Protein RER1A OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0010011 | auxin binding | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016972 | thiol oxidase activity | IEP | HCCA |
| MF | GO:0042562 | hormone binding | IEP | HCCA |
| MF | GO:0046912 | acyltransferase activity, acyl groups converted into alkyl on transfer | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004932 | Rer1 | 24 | 182 |
| No external refs found! |