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  5. Cba_g03417

Cba_g03417 (NUP155)


Aliases : NUP155

Description : scaffold nucleoporin of nuclear pore complex *(NUP155) & original description: none


Gene families : OG0004159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03417

Target Alias Description ECC score Gene Family Method Actions
Adi_g087243 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.03 OrthoFinder output from all 47 species
Als_g01209 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.04 OrthoFinder output from all 47 species
Aob_g18686 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Ehy_g02963 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01011662001 NUP155 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Gb_24664 NUP155 NUP155 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
LOC_Os06g20090.1 NUP155, LOC_Os06g20090 NUP155 scaffold nucleoporin of nuclear pore complex 0.05 OrthoFinder output from all 47 species
Lfl_g02470 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
MA_169470g0010 NUP155 NUP155 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
Mp6g03580.1 NUP155 NUP155 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
Msp_g14719 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.03 OrthoFinder output from all 47 species
Pnu_g19403 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021179 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.03 OrthoFinder output from all 47 species
Solyc07g008160.3.1 NUP155, Solyc07g008160 NUP155 scaffold nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Tin_g01295 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.03 OrthoFinder output from all 47 species
Zm00001e000883_P002 NUP155, Zm00001e000883 NUP155 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007187 Nucleoporin_Nup133/Nup155_C 868 1290
IPR014908 Nucleoporin_Nup133/Nup155_N 53 540
No external refs found!