Cba_g03190 (ATTRB1, TRB1)


Aliases : ATTRB1, TRB1

Description : not classified & original description: none


Gene families : OG0000994 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000994_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03190
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Als_g21441 ATTRB1, TRB1 PRC2-recruiting factor (TRB) of PRC2 histone methylation... 0.02 OrthoFinder output from all 47 species
Ceric.38G003600.1 ATTRB1, TRB1,... not classified & original description: pacid=50579492... 0.03 OrthoFinder output from all 47 species
Ehy_g17070 ATTRB1, TRB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g51154.1 LOC_Os01g51154 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
MA_226g0020 No alias transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Ore_g11264 ATTRB1, TRB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08695 ATTRB1, TRB1 PRC2-recruiting factor (TRB) of PRC2 histone methylation... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0199.g025561 No alias not classified & original description: CDS=197-679 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 125 183
IPR001005 SANT/Myb 5 56
No external refs found!