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  5. Cba_g03151

Cba_g03151


Description : LRR-domain extensin & original description: none


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03151
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.06 OrthoFinder output from all 47 species
AMTR_s00029p00242570 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00242610 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.02 OrthoFinder output from all 47 species
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.08 OrthoFinder output from all 47 species
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.02 OrthoFinder output from all 47 species
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.04 OrthoFinder output from all 47 species
AT2G15880 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT2G19780 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
AT3G19020 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from all 47 species
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
Adi_g004980 LRX2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g085610 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18679 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g37061 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g03898 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g26231 LRX2 LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Als_g03749 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03771 LRX2 LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Als_g39238 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05958 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10583 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11490 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21090 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21238 LRX2 LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene00475.t1 LRX2, Aspi01Gene00475 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01034.t1 LRX2, Aspi01Gene01034 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03958.t1 LRX2, Aspi01Gene03958 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33154.t1 Aspi01Gene33154 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000464 No alias LRR-domain extensin & original description: CDS=1-1719 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011627 LRX2 LRR-domain extensin & original description: CDS=1-1815 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013083 LRX2 not classified & original description: CDS=228-2453 0.04 OrthoFinder output from all 47 species
Azfi_s0050.g031015 No alias LRR-domain extensin & original description: CDS=1-1719 0.02 OrthoFinder output from all 47 species
Cba_g04597 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g55943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G053400.1 Ceric.15G053400 not classified & original description: pacid=50640042... 0.03 OrthoFinder output from all 47 species
Ceric.16G022500.1 Ceric.16G022500 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G055900.1 Ceric.17G055900 LRR-domain extensin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.32G025000.1 Ceric.32G025000 LRR-domain extensin & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g10806 LRX2 LRR-domain extensin & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g15319 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g36028 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g13236 LRX2 LRR-domain extensin & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g15033 LRX2 LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g47264 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18799 LRX2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31890 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009442001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01015276001 No alias Leucine-rich repeat extensin-like protein 4... 0.06 OrthoFinder output from all 47 species
GSVIVT01015416001 No alias Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01034267001 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Gb_10910 LRX2 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Gb_12380 No alias LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Gb_26318 No alias LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Gb_27021 LRX2 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Gb_29819 LRX2 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os01g25460.1 LOC_Os01g25460 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
LOC_Os03g43650.1 LOC_Os03g43650 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os03g55014.1 LOC_Os03g55014 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g58110.1 LOC_Os03g58110 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os05g09640.1 LOC_Os05g09640 Leucine-rich repeat extensin-like protein 4... 0.09 OrthoFinder output from all 47 species
LOC_Os06g49100.1 LRX2, LOC_Os06g49100 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os12g35710.1 LOC_Os12g35710 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Len_g05367 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24034 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Len_g38364 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g14745 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g17909 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
MA_100985g0010 LRX2 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
MA_7188g0010 LRX2 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.03 OrthoFinder output from all 47 species
Msp_g39205 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05430 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11374 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g23899 LRX2 LRR-domain extensin & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40535 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08931 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09607 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05847 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10314 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g31622 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011513 No alias LRR-domain extensin & original description: CDS=1-1296 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012995 LRX2 not classified & original description: CDS=401-2401 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018499 No alias LRR-domain extensin & original description: CDS=1-1542 0.03 OrthoFinder output from all 47 species
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
Smo81544 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Solyc07g053840.1.1 Solyc07g053840 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Solyc10g050110.1.1 Solyc10g050110 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g02389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05733 LRX2 LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g06077 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06078 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09054 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13067 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37100 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53147 LRX2 LRR-domain extensin & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g02020 No alias LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g46219 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007641_P001 Zm00001e007641 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e011874_P001 Zm00001e011874 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e017627_P001 LRX2, Zm00001e017627 Pollen-specific leucine-rich repeat extensin-like... 0.02 OrthoFinder output from all 47 species
Zm00001e031217_P001 Zm00001e031217 Leucine-rich repeat extensin-like protein 4... 0.04 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 78 111
No external refs found!