Cba_g02698 (MRL1)


Aliases : MRL1

Description : rbcL-mRNA stability factor *(MRL1) & original description: none


Gene families : OG0004421 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004421_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g02698

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00357p00011320 MRL1,... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00451p00003410 MRL1,... Pentatricopeptide repeat-containing protein MRL1,... 0.03 OrthoFinder output from all 47 species
AT4G34830 MRL1 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g019868 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g07991 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.11 OrthoFinder output from all 47 species
Ala_g16036 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g02579 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03622 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25379.t1 MRL1, Aspi01Gene25379 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.28G061200.1 Ceric.28G061200 rbcL-mRNA stability factor *(MRL1) & original... 0.07 OrthoFinder output from all 47 species
Dac_g12659 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g03176 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g21513 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10337 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01024119001 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.05 OrthoFinder output from all 47 species
Gb_33501 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.07 OrthoFinder output from all 47 species
LOC_Os10g10170.1 MRL1, LOC_Os10g10170 Pentatricopeptide repeat-containing protein MRL1,... 0.05 OrthoFinder output from all 47 species
Len_g04362 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g02395 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429571g0010 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.05 OrthoFinder output from all 47 species
MA_122602g0010 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.04 OrthoFinder output from all 47 species
Mp3g17150.1 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.08 OrthoFinder output from all 47 species
Mp3g17160.1 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.02 OrthoFinder output from all 47 species
Msp_g25355 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g03133 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08612 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17500 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.1 OrthoFinder output from all 47 species
Pnu_g08167 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02350 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003951 No alias rbcL-mRNA stability factor *(MRL1) & original... 0.05 OrthoFinder output from all 47 species
Sam_g12546 No alias rbcL-mRNA stability factor *(MRL1) & original description: none 0.08 OrthoFinder output from all 47 species
Smo115078 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.02 OrthoFinder output from all 47 species
Smo169254 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.04 OrthoFinder output from all 47 species
Solyc01g111020.3.1 MRL1, Solyc01g111020 Pentatricopeptide repeat-containing protein MRL1,... 0.06 OrthoFinder output from all 47 species
Spa_g01352 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g02143 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 384 431
IPR033443 PPR_long 181 342
IPR002885 Pentatricopeptide_repeat 141 170
IPR002885 Pentatricopeptide_repeat 353 379
IPR002885 Pentatricopeptide_repeat 105 134
No external refs found!