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  5. Cba_g02688

Cba_g02688 (LOS1)


Aliases : LOS1

Description : mRNA-translocation factor *(eEF2)) & original description: none


Gene families : OG0001393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g02688

Target Alias Description ECC score Gene Family Method Actions
Aev_g17437 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.05 OrthoFinder output from all 47 species
Cre12.g516200 LOS1 Protein biosynthesis.translation elongation.eEF2... 0.02 OrthoFinder output from all 47 species
Gb_14897 LOS1 mRNA-translocation factor (eEF2) 0.02 OrthoFinder output from all 47 species
Lfl_g12274 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426758g0020 LOS1 Elongation factor 2 OS=Beta vulgaris... 0.02 OrthoFinder output from all 47 species
Mp2g20190.1 LOS1 mRNA-translocation factor (eEF2) 0.03 OrthoFinder output from all 47 species
Mp2g20200.1 LOS1 mRNA-translocation factor (eEF2) 0.03 OrthoFinder output from all 47 species
Msp_g08640 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29331 LOS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49446 No alias mRNA-translocation factor *(eEF2)) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g062920.3.1 LOS1, Solyc08g062920 mRNA-translocation factor (eEF2) 0.04 OrthoFinder output from all 47 species
Spa_g06405 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06406 LOS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21523 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006293_P001 LOS1, Zm00001e006293 mRNA-translocation factor (eEF2) 0.02 OrthoFinder output from all 47 species
Zm00001e006294_P001 LOS1, Zm00001e006294 mRNA-translocation factor (eEF2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 394 467
IPR005517 Transl_elong_EFG/EF2_IV 611 722
IPR041095 EFG_II 487 549
IPR000795 T_Tr_GTP-bd_dom 17 342
IPR000640 EFG_V-like 724 810
No external refs found!