Cba_g02340


Description : not classified & original description: none


Gene families : OG0004737 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004737_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g02340

Target Alias Description ECC score Gene Family Method Actions
Aev_g07702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g17589 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.11G005200.1 Ceric.11G005200 not classified & original description: pacid=50595468... 0.02 OrthoFinder output from all 47 species
Cre24.g755197 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g52281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008662001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_41477 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g32500.1 LOC_Os11g32500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10432860g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g08900.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g60468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo146861 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g118130.3.1 Solyc03g118130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g03531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24991 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e011158_P001 Zm00001e011158 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!