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  5. Cba_g02107

Cba_g02107 (EMB2780)


Aliases : EMB2780

Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none


Gene families : OG0002006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g02107

Target Alias Description ECC score Gene Family Method Actions
Adi_g057535 EMB2780 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01951 EMB2780 EC_2.7 transferase transferring phosphorus-containing... 0.06 OrthoFinder output from all 47 species
Azfi_s0001.g000975 EMB2780 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011315 ATREV3, REV3 not classified & original description: CDS=841-2013 0.01 OrthoFinder output from all 47 species
Dcu_g13997 EMB2780 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dde_g51710 EMB2780 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os11g08330.1 EMB2780, LOC_Os11g08330 component POLD1 of DNA polymerase delta complex 0.02 OrthoFinder output from all 47 species
Pir_g62878 EMB2780 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02483 EMB2780 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Pp3c10_25280V3.1 EMB2780, Pp3c10_25280 DNA binding;nucleotide binding;nucleic acid... 0.01 OrthoFinder output from all 47 species
Sam_g25588 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR006134 DNA-dir_DNA_pol_B_multi_dom 529 962
IPR025687 Znf-C4pol 999 1070
IPR006133 DNA-dir_DNA_pol_B_exonuc 122 465
No external refs found!