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  5. Cba_g01576

Cba_g01576 (HTA6)


Aliases : HTA6

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g01576

Target Alias Description ECC score Gene Family Method Actions
Aob_g33703 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000349 HTA6 histone *(H2A) & original description: CDS=1-660 0.03 OrthoFinder output from all 47 species
Azfi_s0678.g081837 HTA10 histone *(H2A) & original description: CDS=127-525 0.02 OrthoFinder output from all 47 species
Cba_g78608 HTA2 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001085.4 GAMMA-H2AX,... Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder output from all 47 species
Ehy_g28663 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65929 HTA13 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g28142 HTA2 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025887 GAMMA-H2AX,... histone *(H2A) & original description: CDS=1-531 0.03 OrthoFinder output from all 47 species
Smo170948 GAMMA-H2AX,... Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 95 128
IPR007125 Histone_H2A/H2B/H3 13 92
No external refs found!