Cba_g01251 (ATSCO1/CPEF-G, SCO1, ATSCO1)

Aliases : ATSCO1/CPEF-G, SCO1, ATSCO1

Description : translation elongation factor *(EF-G) & original description: none

Gene families : OG0002078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002078_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g01251
Cluster	HCCA: Cluster_288

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00149p00031690	ATSCO1/CPEF-G,...	Protein biosynthesis.organelle translation...	0.06	OrthoFinder output from all 47 species
AT1G62750	ATSCO1/CPEF-G,...	Translation elongation factor EFG/EF2 protein	0.08	OrthoFinder output from all 47 species
Adi_g024951	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Adi_g087916	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.06	OrthoFinder output from all 47 species
Aev_g08240	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.03	OrthoFinder output from all 47 species
Ala_g02375	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.07	OrthoFinder output from all 47 species
Als_g15105	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.13	OrthoFinder output from all 47 species
Aob_g05315	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.05	OrthoFinder output from all 47 species
Aop_g06164	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.09	OrthoFinder output from all 47 species
Azfi_s0027.g023510	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.06	OrthoFinder output from all 47 species
Ceric.04G106300.1	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.08	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000144.55	No alias	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
Cre02.g076250	ATSCO1/CPEF-G,...	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Cre11.g467553	No alias	Elongation factor G, mitochondrial OS=Oryza sativa...	0.01	OrthoFinder output from all 47 species
Dac_g00996	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.05	OrthoFinder output from all 47 species
Dcu_g08930	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.07	OrthoFinder output from all 47 species
Ehy_g01583	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.05	OrthoFinder output from all 47 species
GSVIVT01006035001	ATSCO1/CPEF-G,...	Protein biosynthesis.organelle translation...	0.06	OrthoFinder output from all 47 species
Gb_36066	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.07	OrthoFinder output from all 47 species
LOC_Os04g45490.1	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.02	OrthoFinder output from all 47 species
Len_g12465	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Len_g18043	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.08	OrthoFinder output from all 47 species
Lfl_g02343	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.09	OrthoFinder output from all 47 species
Mp7g06620.1	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.07	OrthoFinder output from all 47 species
Msp_g07900	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Nbi_g06861	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.05	OrthoFinder output from all 47 species
Ore_g06596	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.08	OrthoFinder output from all 47 species
Pir_g01363	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.05	OrthoFinder output from all 47 species
Pnu_g07398	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Ppi_g15053	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002734	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.07	OrthoFinder output from all 47 species
Sam_g17251	No alias	translation elongation factor *(EF-G) & original...	0.03	OrthoFinder output from all 47 species
Smo143627	ATSCO1/CPEF-G,...	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Solyc08g079180.3.1	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.04	OrthoFinder output from all 47 species
Spa_g05896	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.04	OrthoFinder output from all 47 species
Tin_g01189	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.06	OrthoFinder output from all 47 species
Zm00001e041325_P001	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0004096	catalase activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004176	ATP-dependent peptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
CC	GO:0034357	photosynthetic membrane	IEP	HCCA
CC	GO:0042651	thylakoid membrane	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
MF	GO:0051920	peroxiredoxin activity	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005517	Transl_elong_EFG/EF2_IV	565	683
IPR004161	EFTu-like_2	410	477
IPR000795	T_Tr_GTP-bd_dom	95	367
IPR000640	EFG_V-like	687	773
IPR041095	EFG_II	490	563

External Links

No external refs found!

Cba_g01251 (ATSCO1/CPEF-G, SCO1, ATSCO1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation