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  5. Cba_g00951

Cba_g00951


Description : E3 ubiquitin ligase *(PIRE) & original description: none


Gene families : OG0001463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g00951
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT3G48070 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g110386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G068100.1 Ceric.05G068100 E3 ubiquitin ligase *(PIRE) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G029100.1 Ceric.10G029100 E3 ubiquitin ligase *(PIRE) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01007838001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
MA_102797g0010 No alias RING-C2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_10436110g0020 No alias RING-C2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Nbi_g00816 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24325 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15798 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15078 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37146 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37903 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA

No InterPro domains available for this sequence

No external refs found!