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  5. Sam_g52896

Sam_g52896


Description : not classified & original description: none


Gene families : OG0000194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52896

Target Alias Description ECC score Gene Family Method Actions
Adi_g082705 ACR5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03478.t1 ACR4, Aspi01Gene03478 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G011400.1 ACR4, Ceric.28G011400 not classified & original description: pacid=50570747... 0.02 OrthoFinder output from all 47 species
Dde_g04401 ACR4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04665 ACR4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17522 ACR3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23576 ACR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26517 ACR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g14370.1 ACR8, LOC_Os03g14370 ACT domain-containing protein ACR8 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g17525 ACR4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp8g08180.1 ACR3 ACT domain-containing protein ACR3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Smo124581 ACR3 ACT domain-containing protein ACR3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc08g079650.3.1 ACR8, Solyc08g079650 ACT domain-containing protein ACR8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e001035_P001 ACR8, Zm00001e001035 ACT domain-containing protein ACR8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!