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  5. Sam_g52820

Sam_g52820


Description : not classified & original description: none


Gene families : OG0010331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010331_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52820

Target Alias Description ECC score Gene Family Method Actions
Sam_g17690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 43 87
IPR001611 Leu-rich_rpt 193 213
IPR001611 Leu-rich_rpt 465 526
IPR001611 Leu-rich_rpt 540 600
IPR001611 Leu-rich_rpt 264 322
IPR001611 Leu-rich_rpt 677 736
No external refs found!