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  5. Sam_g52547

Sam_g52547


Description : substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52547

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00023360 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT4G05470 No alias RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G05490 No alias RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G08980 FBW2 F-BOX WITH WD-40 2 0.02 OrthoFinder output from all 47 species
Aspi01Gene29430.t1 FBW2, Aspi01Gene29430 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
GSVIVT01009069001 FBW2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os02g52130.5 FBW2, LOC_Os02g52130 component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
LOC_Os11g41860.1 LOC_Os11g41860 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp5g21380.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006128 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Smo35457 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Zm00001e012415_P001 Zm00001e012415 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e015898_P003 FBW2, Zm00001e015898 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 126 163
No external refs found!