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  5. Sam_g52504

Sam_g52504


Description : not classified & original description: none


Gene families : OG0005975 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52504
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT3G26085 No alias CAAX amino terminal protease family protein 0.06 OrthoFinder output from all 47 species
Adi_g018031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09706 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_34786 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g22930.1 LOC_Os05g22930 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g19924 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039341_P002 Zm00001e039341 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA

No InterPro domains available for this sequence

No external refs found!