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  5. Sam_g52377

Sam_g52377


Description : substrate adaptor *(NRL) of CUL3-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0000772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000772_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52377
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT3G50840 No alias Phototropic-responsive NPH3 family protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene48443.t1 Aspi01Gene48443 substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Ceric.38G003100.1 Ceric.38G003100 substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Dac_g04672 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_31331 No alias BTB/POZ domain-containing protein At1g30440... 0.02 OrthoFinder output from all 47 species
Len_g11572 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Mp7g03290.1 No alias BTB/POZ domain-containing protein At1g30440... 0.02 OrthoFinder output from all 47 species
Nbi_g08002 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Pnu_g17535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000293 No alias not classified & original description: CDS=1-2292 0.02 OrthoFinder output from all 47 species
Spa_g19978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 227 506
IPR000210 BTB/POZ_dom 40 143
No external refs found!