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  5. Sam_g52154

Sam_g52154


Description : not classified & original description: none


Gene families : OG0008115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008115_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52154
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Sacu_v1.1_s0056.g014615 No alias not classified & original description: CDS=224-1738 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:1905037 autophagosome organization IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 262 310
IPR006652 Kelch_1 208 259
No external refs found!