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Sam_g52028


Description : pectin acetylesterase *(PAE) & original description: none


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52028

Target Alias Description ECC score Gene Family Method Actions
AT3G05910 No alias Pectinacetylesterase family protein 0.02 OrthoFinder output from all 47 species
Dac_g07335 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036914001 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
LOC_Os01g66850.1 LOC_Os01g66850 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Lfl_g02963 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10333321g0010 No alias Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g22840.1 No alias pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Smo271371 No alias Cell wall.pectin.modification and degradation.pectin... 0.04 OrthoFinder output from all 47 species
Solyc03g078260.3.1 Solyc03g078260 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc08g075020.3.1 Solyc08g075020 pectin acetylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 36 372
No external refs found!