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Sam_g52027


Description : pectin acetylesterase *(PAE) & original description: none


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52027

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00266820 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
AT3G09405 No alias Pectinacetylesterase family protein 0.03 OrthoFinder output from all 47 species
AT4G19420 No alias Pectinacetylesterase family protein 0.04 OrthoFinder output from all 47 species
Adi_g019164 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03038 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11910 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07335 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g41074 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036914001 No alias Cell wall.pectin.modification and degradation.pectin... 0.04 OrthoFinder output from all 47 species
LOC_Os01g66830.1 LOC_Os01g66830 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os01g66850.1 LOC_Os01g66850 pectin acetylesterase 0.07 OrthoFinder output from all 47 species
LOC_Os10g40290.1 LOC_Os10g40290 Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g49005 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13795 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
MA_8032g0010 No alias Pectin acetylesterase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g22840.1 No alias pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Smo271371 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
Smo447382 No alias Cell wall.pectin.modification and degradation.pectin... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 25 361
No external refs found!