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  5. Sam_g51670

Sam_g51670


Description : transcription factor *(NIN) & original description: none


Gene families : OG0000692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g51670

Target Alias Description ECC score Gene Family Method Actions
AT2G17150 No alias Plant regulator RWP-RK family protein 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g038926 No alias transcription factor *(NIN) & original description: CDS=1285-4890 0.03 OrthoFinder output from all 47 species
Ceric.11G013900.1 Ceric.11G013900 transcription factor *(NIN) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G026100.1 Ceric.31G026100 transcription factor *(NIN) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021168.5 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_03476 NLP7 transcription factor (NLP). NLP6/7 nitrate response... 0.02 OrthoFinder output from all 47 species
LOC_Os09g37710.2 LOC_Os09g37710 transcription factor (NLP). transcription factor (NIN) 0.02 OrthoFinder output from all 47 species
Lfl_g04278 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05467 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19120 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29425 NLP7 transcription factor *(NIN) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011741 NLP7 transcription factor *(NIN) & original description: CDS=1445-5500 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014842 NLP7 transcription factor *(NIN) & original description: CDS=1-3003 0.02 OrthoFinder output from all 47 species
Solyc08g008410.3.1 NLP7, Solyc08g008410 transcription factor (NLP). NLP6/7 nitrate response... 0.04 OrthoFinder output from all 47 species
Solyc08g082750.3.1 NLP7, Solyc08g082750 transcription factor (NLP). NLP6/7 nitrate response... 0.02 OrthoFinder output from all 47 species
Spa_g17522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48233 NLP7 transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26132 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010298_P001 Zm00001e010298 transcription factor (NLP). transcription factor (NIN) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 1233 1313
IPR003035 RWP-RK_dom 877 924
No external refs found!