Sam_g51669


Description : not classified & original description: none


Gene families : OG0000610 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000610_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g51669

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00244990 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00093570 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT5G45030 No alias Trypsin family protein 0.03 OrthoFinder output from all 47 species
Als_g04743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0036.g025765 No alias not classified & original description: CDS=643-2136 0.04 OrthoFinder output from all 47 species
Cba_g05916 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g07627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G028500.1 Ceric.20G028500 not classified & original description: pacid=50567652... 0.02 OrthoFinder output from all 47 species
Ceric.29G061600.1 Ceric.29G061600 not classified & original description: pacid=50624693... 0.06 OrthoFinder output from all 47 species
Ceric.32G026400.1 Ceric.32G026400 not classified & original description: pacid=50597555... 0.02 OrthoFinder output from all 47 species
Ehy_g09739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012074001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g35402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g20080.1 No alias no description available(sp|b4xt64|nal1_orysj : 353.0) 0.01 OrthoFinder output from all 47 species
Msp_g15047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019751 No alias not classified & original description: CDS=854-2797 0.04 OrthoFinder output from all 47 species
Solyc02g068910.3.1 Solyc02g068910 no description available(sp|b4xt64|nal1_orysj : 686.0) 0.03 OrthoFinder output from all 47 species
Zm00001e006587_P001 Zm00001e006587 no description available(sp|b4xt64|nal1_orysj : 736.0) 0.04 OrthoFinder output from all 47 species
Zm00001e006945_P001 Zm00001e006945 no description available(sp|b4xt64|nal1_orysj : 963.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!