Sam_g51391


Description : miRNA cytidylyltransferase *(NTP2/6/7/8) & original description: none


Gene families : OG0000914 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000914_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g51391

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00184490 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G61690 No alias nucleotidyltransferases 0.03 OrthoFinder output from all 47 species
Ala_g07206 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) & original... 0.03 OrthoFinder output from all 47 species
Als_g23236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23709 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) & original... 0.03 OrthoFinder output from all 47 species
Aop_g07777 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) & original... 0.03 OrthoFinder output from all 47 species
Cba_g07271 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) & original... 0.03 OrthoFinder output from all 47 species
Ceric.02G100200.1 Ceric.02G100200 not classified & original description: pacid=50585791... 0.03 OrthoFinder output from all 47 species
Dac_g14034 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g21935 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g21850.1 LOC_Os03g21850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g48170.1 LOC_Os07g48170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g02320.2 LOC_Os11g02320 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_486341g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_70584g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g14083 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) & original... 0.02 OrthoFinder output from all 47 species
Pir_g59785 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014435 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) & original... 0.02 OrthoFinder output from all 47 species
Sam_g28537 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e000696_P003 Zm00001e000696 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023971_P001 Zm00001e023971 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!