Sam_g51353


Description : not classified & original description: none


Gene families : OG0002523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002523_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g51353

Target Alias Description ECC score Gene Family Method Actions
Adi_g032639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g045216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06535.t2 Aspi01Gene06535 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g04300.3 EMB16, EMB2036,... Ankyrin repeat domain-containing protein, chloroplastic... 0.02 OrthoFinder output from all 47 species
Ore_g18520 EMB16, EMB2036, AKRP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04583 EMB139, EMB506 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g061820.4.1 EMB16, EMB2036,... Ankyrin repeat domain-containing protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g47848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 257 349
No external refs found!