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  5. Sam_g51249

Sam_g51249


Description : not classified & original description: none


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g51249

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00134970 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00189870 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00190300 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Aev_g03315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G064300.1 Ceric.03G064300 not classified & original description: pacid=50572356... 0.03 OrthoFinder output from all 47 species
Ceric.17G022700.1 Ceric.17G022700 not classified & original description: pacid=50618371... 0.03 OrthoFinder output from all 47 species
Ceric.21G041700.1 Ceric.21G041700 not classified & original description: pacid=50603626... 0.03 OrthoFinder output from all 47 species
Ceric.27G029900.1 Ceric.27G029900 not classified & original description: pacid=50605026... 0.03 OrthoFinder output from all 47 species
Ehy_g27593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021596001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g03363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000836 No alias not classified & original description: CDS=1-2073 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020758 No alias not classified & original description: CDS=148-2271 0.02 OrthoFinder output from all 47 species
Solyc07g047830.3.1 Solyc07g047830 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g51395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003599_P001 Zm00001e003599 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e027205_P001 Zm00001e027205 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e035963_P001 Zm00001e035963 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006867 DUF632 148 454
No external refs found!