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  5. Sam_g50954

Sam_g50954


Description : ornithine decarboxylase & original description: none


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50954
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Adi_g097245 No alias ornithine decarboxylase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10694 No alias ornithine decarboxylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28046 No alias ornithine decarboxylase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g34996 No alias ornithine decarboxylase & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g43010 No alias ornithine decarboxylase & original description: none 0.1 OrthoFinder output from all 47 species
Sam_g43304 No alias ornithine decarboxylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g32606 No alias ornithine decarboxylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42816 No alias ornithine decarboxylase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR022644 De-COase2_N 2 165
IPR022643 De-COase2_C 166 263
No external refs found!