Sam_g50623

Description : arogenate dehydratase *(ADT) & original description: none

Gene families : OG0000302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000302_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g50623
Cluster	HCCA: Cluster_134

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene14520.t1	ADT6, Aspi01Gene14520	arogenate dehydratase *(ADT) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.27G028000.1	ADT3, PD1,...	arogenate dehydratase *(ADT) & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g00881	ADT6	arogenate dehydratase *(ADT) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g35982	ADT6	arogenate dehydratase *(ADT) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os04g33390.1	ADT6, LOC_Os04g33390	arogenate dehydratase (ADT)	0.02	OrthoFinder output from all 47 species
LOC_Os10g37980.1	ADT6, LOC_Os10g37980	arogenate dehydratase (ADT)	0.02	OrthoFinder output from all 47 species
MA_7947g0030	ADT6	arogenate dehydratase (ADT)	0.02	OrthoFinder output from all 47 species
Ore_g06500	ADT6	arogenate dehydratase *(ADT) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g47210	ADT2	arogenate dehydratase *(ADT) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004784	ADT6	arogenate dehydratase *(ADT) & original description: CDS=440-1597	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017139	ADT6	not classified & original description: CDS=230-574	0.02	OrthoFinder output from all 47 species
Spa_g20097	ADT6	arogenate dehydratase *(ADT) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004664	prephenate dehydratase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006558	L-phenylalanine metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009072	aromatic amino acid metabolic process	None	Extended
BP	GO:0009073	aromatic amino acid family biosynthetic process	None	Extended
BP	GO:0009094	L-phenylalanine biosynthetic process	IEA	Interproscan
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	None	Extended
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001086	Preph_deHydtase	10	186

External Links

No external refs found!

Sam_g50623

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation