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  5. Sam_g50494

Sam_g50494


Description : not classified & original description: none


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50494
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT3G46110 No alias Domain of unknown function (DUF966) 0.02 OrthoFinder output from all 47 species
AT5G10150 No alias Domain of unknown function (DUF966) 0.03 OrthoFinder output from all 47 species
Aev_g07884 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12604 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g22133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18845.t1 Aspi01Gene18845 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19661.t1 Aspi01Gene19661 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25837.t1 Aspi01Gene25837 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G026100.1 Ceric.13G026100 not classified & original description: pacid=50635606... 0.03 OrthoFinder output from all 47 species
Ceric.23G080300.1 Ceric.23G080300 not classified & original description: pacid=50610288... 0.05 OrthoFinder output from all 47 species
Dac_g16699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016603001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os01g74370.1 LOC_Os01g74370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g48600.1 LOC_Os03g48600 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os08g44760.1 LOC_Os08g44760 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g39750.1 LOC_Os09g39750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g60880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g066380.3.1 Solyc11g066380 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc11g073110.2.1 Solyc11g073110 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e000820_P002 Zm00001e000820 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e003892_P002 Zm00001e003892 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e005317_P002 Zm00001e005317 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e022043_P001 Zm00001e022043 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e028781_P001 Zm00001e028781 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR010369 SOK 48 291
No external refs found!