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  5. Sam_g50391

Sam_g50391


Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50391

Target Alias Description ECC score Gene Family Method Actions
Aob_g41442 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Aop_g53020 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g29872 No alias UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44064 No alias UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g44714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g36229 No alias UBQ ubiquitin-fold protein & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g36577 No alias UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g42695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g38525 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!