Sam_g50169

Description : deubiquitinase *(UBP15-21) & original description: none

Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g50169

Target	Alias	Description	ECC score	Gene Family Method
AT2G24640	UBP19	ubiquitin-specific protease 19	0.03	OrthoFinder output from all 47 species
AT3G14400	UBP25	ubiquitin-specific protease 25	0.06	OrthoFinder output from all 47 species
Adi_g114102	UBP23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g02390	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g08916	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene26829.t1	UBP23, Aspi01Gene26829	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49835.t1	UBP18, Aspi01Gene49835	deubiquitinase *(UBP15-21) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene54061.t1	UBP23, Aspi01Gene54061	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0152.g053417	UBP23	deubiquitinase *(UBP23) & original description: CDS=120-2471	0.03	OrthoFinder output from all 47 species
Cba_g01298	UBP25	deubiquitinase *(UBP25) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g12069	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Cre14.g629300	UBP23	Protein degradation.peptidase families.cysteine-type...	0.02	OrthoFinder output from all 47 species
Dcu_g26398	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g31799	UBP19	deubiquitinase *(UBP15-21) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01001911001	No alias	No description available	0.04	OrthoFinder output from all 47 species
GSVIVT01001912001	UBP23	Protein degradation.peptidase families.cysteine-type...	0.04	OrthoFinder output from all 47 species
GSVIVT01038082001	UBP25	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
Len_g01378	UBP25	deubiquitinase *(UBP25) & original description: none	0.02	OrthoFinder output from all 47 species
Mp3g16110.1	UBP23	deubiquitinase (UBP23)	0.02	OrthoFinder output from all 47 species
Pnu_g08804	UBP23	deubiquitinase *(UBP23) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g08463	No alias	deubiquitinase *(UBP25) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g26124	UBP23	deubiquitinase *(UBP23) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0010181	FMN binding	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
CC	GO:0032039	integrator complex	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0042274	ribosomal small subunit biogenesis	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	5	251

External Links

No external refs found!

Sam_g50169

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation