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  5. Sam_g49794

Sam_g49794


Description : EIL-type transcription factor & original description: none


Gene families : OG0000587 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000587_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g49794

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00117410 EIL1, AtEIL1,... RNA biosynthesis.transcriptional activation.EIL... 0.02 OrthoFinder output from all 47 species
Adi_g041306 EIL1, AtEIL1 EIL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24335 EIL1, AtEIL1 EIL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20729 AtEIN3, EIN3 EIL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001522_P001 AtEIN3, EIN3,... EIN3-type ethylene signal transducer. transcription factor (EIL) 0.03 OrthoFinder output from all 47 species
Zm00001e034536_P001 SLIM1, ATSLIM,... EIN3-type ethylene signal transducer. transcription factor (EIL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009254 peptidoglycan turnover IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006957 EIN3 42 285
No external refs found!