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  5. Sam_g49776

Sam_g49776


Description : not classified & original description: none


Gene families : OG0002436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g49776
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Ala_g29595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016565 No alias not classified & original description: CDS=37-546 0.02 OrthoFinder output from all 47 species
Sam_g01433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g41856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 521 628
No external refs found!