Lfl_g30330 (PMIT1, NRAMP1, ATNRAMP1)

Aliases : PMIT1, NRAMP1, ATNRAMP1

Description : metal cation transporter *(NRAMP) & original description: none

Gene families : OG0000603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000603_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g30330
Cluster	HCCA: Cluster_134

Target	Alias	Description	ECC score	Gene Family Method
Adi_g059631	NRAMP6, ATNRAMP6	metal cation transporter *(NRAMP) & original description: none	0.04	OrthoFinder output from all 47 species
Cre05.g248300	ATNRAMP4, NRAMP4	Solute transport.carrier-mediated transport.APC...	0.02	OrthoFinder output from all 47 species
Gb_30457	ATNRAMP3, NRAMP3	metal cation transporter (NRAMP)	0.02	OrthoFinder output from all 47 species
LOC_Os01g31870.1	PMIT1, NRAMP1,...	metal cation transporter (NRAMP)	0.03	OrthoFinder output from all 47 species
MA_104715g0010	PMIT1, NRAMP1, ATNRAMP1	Metal transporter Nramp5 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Ppi_g28944	PMIT1, NRAMP1, ATNRAMP1	metal cation transporter *(NRAMP) & original description: none	0.03	OrthoFinder output from all 47 species
Smo417169	ATNRAMP4, NRAMP4	Solute transport.carrier-mediated transport.APC...	0.03	OrthoFinder output from all 47 species
Zm00001e013557_P001	PMIT1, NRAMP1,...	metal cation transporter (NRAMP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	IEA	Interproscan
MF	GO:0046873	metal ion transmembrane transporter activity	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008373	sialyltransferase activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0009452	7-methylguanosine RNA capping	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0036260	RNA capping	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001046	NRAMP_fam	127	486

External Links

No external refs found!

Lfl_g30330 (PMIT1, NRAMP1, ATNRAMP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation