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  5. Sam_g49715

Sam_g49715


Description : AHL clade-B transcription factor & original description: none


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g49715

Target Alias Description ECC score Gene Family Method Actions
Aob_g16755 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29441 No alias AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os10g42230.2 LOC_Os10g42230 AT-hook motif nuclear-localized protein 10... 0.02 OrthoFinder output from all 47 species
LOC_Os12g05200.1 ATAHL1, AHL1,... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g54451 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05045 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0000145 exocyst IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 94 207
No external refs found!