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  5. Sam_g49364

Sam_g49364


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0002535 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002535_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g49364
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00158530 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.05 OrthoFinder output from all 47 species
AT4G29360 No alias O-Glycosyl hydrolases family 17 protein 0.03 OrthoFinder output from all 47 species
Als_g11891 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04338 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0136.g050962 No alias EC_3.2 glycosylase & original description: CDS=69-1574 0.03 OrthoFinder output from all 47 species
Cba_g11476 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G053700.1 Ceric.15G053700 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G070700.1 Ceric.29G070700 EC_3.2 glycosylase & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g37077 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40044 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015282001 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_19444 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g53750.1 LOC_Os01g53750 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g01266 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16381 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31395 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10875 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14869 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011980 No alias EC_3.2 glycosylase & original description: CDS=1-1419 0.06 OrthoFinder output from all 47 species
Solyc12g008580.2.1 Solyc12g008580 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g51982 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12160 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019867_P001 Zm00001e019867 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 31 348
IPR012946 X8 366 438
No external refs found!