Sam_g49263

Description : pyrimidine reductase *(PyrR) & original description: none

Gene families : OG0003101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003101_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g49263

Target	Alias	Description	ECC score	Gene Family Method
AT3G47390	PHS1	cytidine/deoxycytidylate deaminase family protein	0.02	OrthoFinder output from all 47 species
Ala_g09121	PHS1	pyrimidine reductase *(PyrR) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g05011	PHS1	pyrimidine reductase *(PyrR) & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001545.1	No alias	No description available	0.01	OrthoFinder output from all 47 species
Dde_g21112	PHS1	pyrimidine reductase *(PyrR) & original description: none	0.03	OrthoFinder output from all 47 species
Gb_30511	PHS1	pyrimidine reductase	0.03	OrthoFinder output from all 47 species
Len_g02374	PHS1	pyrimidine reductase *(PyrR) & original description: none	0.04	OrthoFinder output from all 47 species
MA_7675554g0010	PHS1	pyrimidine reductase	0.02	OrthoFinder output from all 47 species
Mp8g14730.1	PHS1	pyrimidine reductase	0.02	OrthoFinder output from all 47 species
Solyc04g056540.3.1	PHS1, Solyc04g056540	pyrimidine reductase	0.05	OrthoFinder output from all 47 species
Spa_g22679	PHS1	pyrimidine reductase *(PyrR) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e014552_P002	PHS1, Zm00001e014552	pyrimidine reductase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006771	riboflavin metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008703	5-amino-6-(5-phosphoribosylamino)uracil reductase activity	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009231	riboflavin biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
BP	GO:0042726	flavin-containing compound metabolic process	None	Extended
BP	GO:0042727	flavin-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003725	double-stranded RNA binding	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006415	translational termination	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
BP	GO:0022411	cellular component disassembly	IEP	HCCA
BP	GO:0032984	protein-containing complex disassembly	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0071586	CAAX-box protein processing	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002734	RibDG_C	169	372
IPR012816	NADAR	411	563

External Links

No external refs found!

Sam_g49263

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation