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Description : adherin *(SCC2) & original description: none
Gene families : OG0005074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005074_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g48907 | |
| Cluster | HCCA: Cluster_141 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00110p00053630 | SCC2, ATSCC2,... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G15540 | SCC2, ATSCC2, EMB2773 | PHD finger family protein | 0.16 | OrthoFinder output from all 47 species | |
| Adi_g086269 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04894 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g16239 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Als_g08111 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g31097 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene15029.t1 | SCC2, ATSCC2,... | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007745 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: CDS=544-5985 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G000800.1 | SCC2, ATSCC2,... | adherin *(SCC2) & original description: pacid=50634323... | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g39401 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Dde_g02409 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g06224 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01011514001 | SCC2, ATSCC2, EMB2773 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.1 | OrthoFinder output from all 47 species | |
| Gb_05661 | SCC2, ATSCC2, EMB2773 | adherin (SCC2) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_41687 | SCC2, ATSCC2, EMB2773 | adherin (SCC2) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os07g01940.1 | SCC2, ATSCC2,... | adherin (SCC2) | 0.07 | OrthoFinder output from all 47 species | |
| Len_g24640 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05042 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| MA_10437214g0020 | SCC2, ATSCC2, EMB2773 | adherin (SCC2) | 0.1 | OrthoFinder output from all 47 species | |
| Mp4g10640.1 | SCC2, ATSCC2, EMB2773 | adherin (SCC2) | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g24576 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g28623 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g28888 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g08021 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ppi_g05355 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015105 | SCC2, ATSCC2, EMB2773 | not classified & original description: CDS=1-927 | 0.03 | OrthoFinder output from all 47 species | |
| Smo440913 | SCC2, ATSCC2, EMB2773 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g04412 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g05250 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e011569_P001 | SCC2, ATSCC2,... | adherin (SCC2) | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e032695_P001 | SCC2, ATSCC2,... | adherin (SCC2) | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024986 | Nipped-B_C | 1337 | 1531 |
| No external refs found! |