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  5. Sam_g48823

Sam_g48823


Description : class III ARF-GAP ARF-GTPase-activating protein & original description: none


Gene families : OG0000461 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g48823
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00013660 evm_27.TU.AmTr_v1... Probable ADP-ribosylation factor GTPase-activating... 0.03 OrthoFinder output from all 47 species
Ceric.08G029100.1 AGD12, ZAC,... not classified & original description: pacid=50638946... 0.03 OrthoFinder output from all 47 species
Gb_36351 No alias Probable ADP-ribosylation factor GTPase-activating... 0.03 OrthoFinder output from all 47 species
Len_g03120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426450g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g29587 No alias class III ARF-GAP ARF-GTPase-activating protein &... 0.04 OrthoFinder output from all 47 species
Tin_g11078 AGD12, ZAC not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e032678_P001 Zm00001e032678 CAR abscisic acid receptor recruitment factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001164 ArfGAP_dom 51 166
IPR000008 C2_dom 206 297
No external refs found!