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  5. Lfl_g30222

Lfl_g30222 (STI)


Aliases : STI

Description : not classified & original description: none


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g30222

Target Alias Description ECC score Gene Family Method Actions
Adi_g015955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17547 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0055.g034013 STI not classified & original description: CDS=1-4041 0.07 OrthoFinder output from all 47 species
Azfi_s0074.g037356 STI not classified & original description: CDS=1-3111 0.04 OrthoFinder output from all 47 species
Azfi_s0377.g067305 STI not classified & original description: CDS=1-3390 0.04 OrthoFinder output from all 47 species
Cba_g14582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14646 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G078500.1 STI, Ceric.09G078500 not classified & original description: pacid=50587415... 0.04 OrthoFinder output from all 47 species
Ceric.18G081700.1 STI, Ceric.18G081700 not classified & original description: pacid=50622228... 0.03 OrthoFinder output from all 47 species
Ceric.23G075900.1 STI, Ceric.23G075900 not classified & original description: pacid=50610074... 0.04 OrthoFinder output from all 47 species
Dcu_g05768 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19715 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os11g13990.1 STI, LOC_Os11g13990 Protein STICHEL OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g10670.1 STI, LOC_Os12g10670 Protein STICHEL OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g19180.1 LOC_Os12g19180 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_77080g0010 STI Protein STICHEL OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g13040.1 STI Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g39999 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61848 STI not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021751 No alias not classified & original description: CDS=344-4516 0.05 OrthoFinder output from all 47 species
Sam_g08406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo420117 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Zm00001e019639_P005 STI, Zm00001e019639 Protein STICHEL OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e032180_P001 Zm00001e032180 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e039775_P001 STI, Zm00001e039775 Protein STICHEL OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e041094_P002 Zm00001e041094 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 717 783
No external refs found!