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  5. Sam_g48616

Sam_g48616


Description : translation peptide chain release factor *(PrfB) & original description: none


Gene families : OG0002101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g48616

Target Alias Description ECC score Gene Family Method Actions
AT1G56350 No alias Peptide chain release factor 2 0.04 OrthoFinder output from all 47 species
Azfi_s0059.g034574 No alias translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01033556001 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Gb_09148 No alias PrfB-type translation peptide chain release factor 0.04 OrthoFinder output from all 47 species
Solyc01g100420.3.1 Solyc01g100420 PrfB-type translation peptide chain release factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006415 translational termination IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR000352 Pep_chain_release_fac_I 306 413
IPR005139 PCRF 107 295
No external refs found!