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  5. Sam_g48455

Sam_g48455


Description : iron-sulfur-cluster assembly transfer factor *(NEET) & original description: none


Gene families : OG0006249 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g48455
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Ala_g21495 No alias iron-sulfur-cluster assembly transfer factor *(NEET) &... 0.04 OrthoFinder output from all 47 species
Dcu_g39568 No alias iron-sulfur-cluster assembly transfer factor *(NEET) &... 0.05 OrthoFinder output from all 47 species
Ehy_g05153 No alias iron-sulfur-cluster assembly transfer factor *(NEET) &... 0.02 OrthoFinder output from all 47 species
Len_g05506 No alias iron-sulfur-cluster assembly transfer factor *(NEET) &... 0.1 OrthoFinder output from all 47 species
Len_g27341 No alias iron-sulfur-cluster assembly transfer factor *(NEET) &... 0.02 OrthoFinder output from all 47 species
Ore_g04373 No alias iron-sulfur-cluster assembly transfer factor *(NEET) &... 0.02 OrthoFinder output from all 47 species
Ore_g04374 No alias iron-sulfur-cluster assembly transfer factor *(NEET) &... 0.03 OrthoFinder output from all 47 species
Pir_g56290 No alias iron-sulfur-cluster assembly transfer factor *(NEET) &... 0.04 OrthoFinder output from all 47 species
Solyc03g007030.3.1 Solyc03g007030 CDGSH iron-sulfur domain-containing protein NEET... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0043231 intracellular membrane-bounded organelle IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR018967 FeS-contain_CDGSH-typ 79 102
No external refs found!