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  5. Sam_g48039

Sam_g48039


Description : actin-depolymerizing factor & original description: none


Gene families : OG0000202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g48039
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Adi_g018985 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080661 ADF8 actin-depolymerizing factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g106990 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g124314 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g127777 ADF3 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g45292 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g53563 ADF11 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57628 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63569 ADF10 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16430 ADF10 actin-depolymerizing factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21756 ADF10 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25774 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70024 ADF11 actin-depolymerizing factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g65126 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.41 ADF10 Cytoskeleton.microfilament network.actin... 0.01 OrthoFinder output from all 47 species
Dac_g29050 ADF11 actin-depolymerizing factor & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g21899 ADF10 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22895 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03281 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16516 ADF10 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22002 ADF11 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24731 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08041 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55476 ADF11 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11839 ADF3 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15449 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32090 ADF10 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05379 No alias actin-depolymerizing factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g20237 No alias actin-depolymerizing factor & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g22380 No alias actin-depolymerizing factor & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g23833 No alias actin-depolymerizing factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g31342 No alias actin-depolymerizing factor & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g43203 No alias actin-depolymerizing factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g48490 No alias actin-depolymerizing factor & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g48491 No alias actin-depolymerizing factor & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g35543 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48807 ADF2 actin-depolymerizing factor & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g00178 ADF7 acTin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18243 ADF10 acTin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003785 actin monomer binding IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006123 mitochondrial electron transport, cytochrome c to oxygen IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008073 ornithine decarboxylase inhibitor activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0042979 ornithine decarboxylase regulator activity IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 11 135
No external refs found!