Sam_g47387


Description : not classified & original description: none


Gene families : OG0001005 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g47387

Target Alias Description ECC score Gene Family Method Actions
Als_g15302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18226.t1 Aspi01Gene18226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48313.t1 Aspi01Gene48313 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63912.t1 Aspi01Gene63912 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g40010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65950 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009582 No alias not classified & original description: CDS=1401-2480 0.02 OrthoFinder output from all 47 species
Sam_g00548 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g39588 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g44615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!