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  5. Sam_g47302

Sam_g47302


Description : not classified & original description: none


Gene families : OG0000434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000434_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g47302
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00249400 evm_27.TU.AmTr_v1... Protein MOTHER of FT and TFL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G65480 FT PEBP (phosphatidylethanolamine-binding protein) family protein 0.02 OrthoFinder output from all 47 species
Aev_g39970 TFL-1, TFL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G000200.1 E12A11, MFT,... not classified & original description: pacid=50620746... 0.03 OrthoFinder output from all 47 species
Dcu_g12975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003663001 E12A11, MFT Protein MOTHER of FT and TFL1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
MA_400747g0010 FT PEB protein-dependent signalling regulatory protein (PEBP) 0.03 OrthoFinder output from all 47 species
MA_66653g0010 E12A11, MFT PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Sam_g33595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g119100.2.1 E12A11, MFT,... PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008914 PEBP 64 172
No external refs found!