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  5. Sam_g47248

Sam_g47248


Description : SUMO ubiquitin-fold protein & original description: none


Gene families : OG0001456 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001456_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g47248
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Ehy_g17330 SUMO1, SUMO 1,... SUMO ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05601 SUMO1, SUMO 1,... SUMO ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g37314 SUMO1, SUMO 1,... SUMO ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50165 No alias SUMO ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Smo171605 SUMO1, SUMO 1,... Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR022617 Rad60/SUMO-like_dom 17 86
No external refs found!