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  5. Sam_g46772

Sam_g46772


Description : not classified & original description: none


Gene families : OG0004479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g46772
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Ala_g01739 GIL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g50192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G017800.1 Ceric.01G017800 not classified & original description: pacid=50590747... 0.02 OrthoFinder output from all 47 species
Ceric.26G027700.1 GIL1, Ceric.26G027700 not classified & original description: pacid=50599308... 0.03 OrthoFinder output from all 47 species
Ceric.26G030800.1 Ceric.26G030800 not classified & original description: pacid=50600197... 0.04 OrthoFinder output from all 47 species
Nbi_g36207 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g36046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08688 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g42330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36230 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g40690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!