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  5. Sam_g46619

Sam_g46619


Description : not classified & original description: none


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g46619

Target Alias Description ECC score Gene Family Method Actions
AT1G14870 PCR2 PLANT CADMIUM RESISTANCE 2 0.03 OrthoFinder output from all 47 species
AT2G40935 No alias PLAC8 family protein 0.02 OrthoFinder output from all 47 species
Cba_g10007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025863001 No alias Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g36940.1 LOC_Os02g36940 Cell number regulator 2 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Len_g49051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g005470.3.1 PCR2, Solyc01g005470 Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc03g093200.3.1 Solyc03g093200 Cell number regulator 6 OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Solyc04g007900.3.1 PCR2, Solyc04g007900 Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc10g018920.2.1 Solyc10g018920 Cell number regulator 6 OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 87 200
No external refs found!