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  5. Sam_g46200

Sam_g46200


Description : profilin actin nucleation protein & original description: none


Gene families : OG0000183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g46200
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Adi_g043156 No alias profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079163 No alias profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g120059 PRF5 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g124094 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g128549 No alias profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33142 PFN1, PRF1 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62070 PRF5 profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g70185 PRF5 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17217 No alias profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g26195 PRF5 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g34895 PRF5 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g17660.1 PRF5, LOC_Os10g17660 profilin actin nucleation protein 0.01 OrthoFinder output from all 47 species
Lfl_g31963 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g36295 No alias profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38364 PRF5 profilin actin nucleation protein & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g29078 No alias profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g31896 No alias profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g32131 No alias profilin actin nucleation protein & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g40147 No alias profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027449_P001 PRF4, Zm00001e027449 profilin actin nucleation protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR005455 PFN 1 127
No external refs found!